Gene editing: how to stay on-target with CRISPR

Abstract

Efficiently cutting a target sequence to effect a desired change in the genome is one gene-editing task. Knowing where else in the genome a tool might have made its mark is quite another.



Table: CRISPR off target prediction tools
CasOT PKU Zebrafish Functional Genomics group, Peking University
CHOPCHOP Harvard University
CRISPR Design Feng Zhang, Massachusetts Institute of Technology
CRISPR Design tool The Broad Institute of Harvard and MIT
CRISPR/Cas9 gRNA finder Jack Lin, University of Colorado
CRISPRfinder Christine Pourcel, Université Paris-Sud 11
E-CRISP DKFZ German Cancer Research Center
CRISPR gRNA Design tool DNA 2.0
PROGNOS Gang Bao, Emory University/Georgia Institute of Technology
ZiFiT Keith Joung, Massachusetts General Hospital
Reference:Vivien Marx. Gene editing: how to stay on-target with CRISPR. Nature Methods 11, 1021–1026 (2014)

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